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Anisotropy of fluctuation dynamics of proteins with an elastic network model.
- A. Atilgan, S. Durell, R. Jernigan, M. Demirel, O. Keskin, I. Bahar
- BiologyBiophysical journal
- 2001
Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential.
- I. Bahar, A. Atilgan, B. Erman
- PhysicsFolding & design
- 1 June 1997
Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells
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Gaussian Dynamics of Folded Proteins
- T. Haliloglu, I. Bahar, B. Erman
- Physics
- 20 October 1997
Vibrational dynamics of folded proteins is studied using a Gaussian model in which the protein is viewed as a network, residues representing the junctions, and the connectivity being established by a…
ProDy: Protein Dynamics Inferred from Theory and Experiments
- A. Bakan, Lidio M. C. Meireles, I. Bahar
- BiologyBioinform.
- 5 April 2011
Summary: We developed a Python package, ProDy, for structure-based analysis of protein dynamics. ProDy allows for quantitative characterization of structural variations in heterogeneous datasets of…
Normal mode analysis of biomolecular structures: functional mechanisms of membrane proteins.
- I. Bahar, T. Lezon, A. Bakan, I. Shrivastava
- Chemistry, BiologyChemical reviews
- 10 March 2010
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Oxidized arachidonic and adrenic PEs navigate cells to ferroptosis.
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Global dynamics of proteins: bridging between structure and function.
- I. Bahar, T. Lezon, Lee-Wei Yang, E. Eyal
- BiologyAnnual review of biophysics
- 12 May 2010
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Bistability in apoptosis: roles of bax, bcl-2, and mitochondrial permeability transition pores.
- E. Z. Bagci, Y. Vodovotz, T. Billiar, G. Ermentrout, I. Bahar
- BiologyBiophysical journal
- 1 March 2006
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