Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes
- S. Adl, D. Bass, Qianqian Zhang
- BiologyJournal of Eukaryotic Microbiology
- 26 September 2018
It is confirmed that eukaryotes form at least two domains, the loss of monophyly in the Excavata, robust support for the Haptista and Cryptista, and suggested primer sets for DNA sequences from environmental samples that are effective for each clade are provided.
Critical taxonomic revision of Parabasalids with description of one new genus and three new species.
- I. Čepička, V. Hampl, J. Kulda
- BiologyProtist
- 1 July 2010
CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms
- J. Pawłowski, S. Audic, C. de Vargas
- BiologyPLoS Biology
- 1 November 2012
A group of protist experts proposes a two-step DNA barcoding approach, comprising a universal eukaryotic pre-barcode followed by group-specific barcodes, to unveil the hidden biodiversity of…
New evolutionary lineages, unexpected diversity, and host specificity in the parabasalid genus Tetratrichomonas.
- I. Čepička, V. Hampl, J. Kulda, J. Flegr
- BiologyMolecular Phylogenetics and Evolution
- 1 May 2006
Biodiversity of avian trypanosomes.
- L. Žídková, I. Čepička, J. Szabová, M. Svobodová
- BiologyInfection, Genetics and Evolution
- 2012
Between a Pod and a Hard Test: The Deep Evolution of Amoebae
- Seungho Kang, Alexander K Tice, Matthew W. Brown
- BiologyMolecular biology and evolution
- 15 May 2017
The results support the hypothesis that the last common ancestor of Amoebozoa was sexual and flagellated, and it also may have had the ability to disperse propagules from a sporocarp-type fruiting body.
Cryptic species within the Tetratrichomonas gallinarum species complex revealed by molecular polymorphism.
- I. Čepička, K. Kutisová, J. Tachezy, J. Kulda, J. Flegr
- BiologyVeterinary parasitology
- 10 March 2005
SlowFaster, a user-friendly program for slow-fast analysis and its application on phylogeny of Blastocystis
- M. Kostka, M. Uzlikova, I. Čepička, J. Flegr
- BiologyBMC Bioinformatics
- 15 August 2008
SlowFaster is a user-friendly tool providing new alignments prepared with slow-fast analysis, which can be used for further phylogenetic analyses with lower risk of long branch attraction artifacts.
Critical analysis of the topology and rooting of the parabasalian 16S rRNA tree.
- V. Hampl, I. Čepička, J. Flegr, J. Tachezy, J. Kulda
- BiologyMolecular Phylogenetics and Evolution
- 1 September 2004
The tree topology in the view of anagenesis of cytoskeletal and motility organelles is discussed and it is suggested that a robust taxonomic revision requires extensive analysis of other gene sequences.
Sergeia podlipaevi gen. nov., sp. nov. (Trypanosomatidae, Kinetoplastida), a parasite of biting midges (Ceratopogonidae, Diptera).
- M. Svobodová, L. Žídková, I. Čepička, M. Oborník, J. Lukeš, J. Votýpka
- BiologyInternational Journal of Systematic and…
- 1 February 2007
Morphological characteristics and sequences of the 18S rRNA, 5S r RNA, spliced leader RNA and glycosomal glyceraldehyde-3-phosphate dehydrogenase genes indicate that the studied flagellates represent a novel phylogenetic lineage within the Trypanosomatidae.
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