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In this paper, we report an active contour algorithm that is capable of using prior shapes. The energy functional of the contour is modified so that the energy depends on the image gradient as well as the prior shape. The model provides the segmentation and the transformation that maps the segmented contour to the prior shape. The active contour is able to(More)
We propose a definition of local resolution for three-dimensional electron cryo-microscopy (cryo-EM) density maps that uses local sinusoidal features. Our algorithm has no free parameters and is applicable to other imaging modalities, including tomography. By evaluating the local resolution of single-particle reconstructions and subtomogram averages for(More)
This paper proposes L 2-and information-theory-based (IT) non-rigid registration algorithms that are exactly symmetric. Such algorithms pair the same points of two images after the images are swapped. Many commonly-used L 2 and IT non-rigid registration algorithms are only approximately symmetric. The asymmetry is due to the objective function as well as(More)
We present a coupled minimization problem for image segmentation using prior shape and intensity profile. One part of the model minimizes a shape related energy and the energy of geometric active contour with a parameter that balances the influence from these two. The minimizer corresponding to a fixed parameter in this minimization gives a segmentation and(More)
ÐA precise analysis of an entire image is computationally wasteful if one is interested in finding a target object located in a subregion of the image. A useful ªattention strategyº can reduce the overall computation by carrying out fast but approximate image measurements and using their results to suggest a promising subregion. This paper proposes a(More)
In this note we present a coupled optimization model for boundary determination. One part of the model incorporates a prior shape into a geometric active contour model with a fixed parameter. The second part determines the 'best' parameter used in the first part by maximizing the mutual information of the image geometry between the prior and an aligned(More)
Non-rigid registration of medical images is often posed as an algorithmic problem. While algorithms are important, it is equally critical to investigate non-rigid registration ax-iomatically: what properties should a registration algorithm posses and how do these properties influence the objective functions of the registration algorithms? In this paper, we(More)