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PlasmoDB (http://PlasmoDB.org) is a functional genomic database for Plasmodium spp. that provides a resource for data analysis and visualization in a gene-by-gene or genome-wide scale. PlasmoDB belongs to a family of genomic resources that are housed under the EuPathDB (http://EuPathDB.org) Bioinformatics Resource Center (BRC) umbrella. The latest release,(More)
TriTrypDB (http://tritrypdb.org) is an integrated database providing access to genome-scale datasets for kinetoplastid parasites, and supporting a variety of complex queries driven by research and development needs. TriTrypDB is a collaborative project, utilizing the GUS/WDK computational infrastructure developed by the Eukaryotic Pathogen Bioinformatics(More)
—A hybrid system of cellular mode and device-to-device (D2D) mode is considered in this paper, where the cellular uplink resource is reused by the D2D transmission. In order to maximize the overall system performance, the mutual interference between cellular and D2D subsystems has to be addressed. Here, two mechanisms are proposed to solve the problem: One(More)
This paper presents approaches of link to system mapping for OFDM/multi-carrier mobile communications systems. Mainly, the effective SINR method is highlighted, which includes EESM and MI-ESM. It is shown how the multi-state channels are integrated into a single state in system simulator with effective SINR approach and why the effective SINR can represent(More)
EuPathDB (http://EuPathDB.org; formerly ApiDB) is an integrated database covering the eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an(More)
BACKGROUND Perkinsus marinus, a protozoan parasite of the eastern oyster Crassostrea virginica, has devastated natural and farmed oyster populations along the Atlantic and Gulf coasts of the United States. It is classified as a member of the Perkinsozoa, a recently established phylum considered close to the ancestor of ciliates, dinoflagellates, and(More)
Improved knowledge of the sorghum transcriptome will enhance basic understanding of how plants respond to stresses and serve as a source of genes of value to agriculture. Toward this goal, Sorghum bicolor L. Moench cDNA libraries were prepared from light- and dark-grown seedlings, drought-stressed plants, Colletotrichum-infected seedlings and plants,(More)
BACKGROUND Processing raw DNA sequence data is an especially challenging task for relatively small laboratories and core facilities that produce as many as 5000 or more DNA sequences per week from multiple projects in widely differing species. To meet this challenge, we have developed the flexible, scalable, and automated sequence processing package(More)
This paper presents some evaluation methodologies for a B3G system adopting OFDMA as its multiple access method from system level's point of view. A system level simulator is established to assess the performance of the B3G system based on OFDM or multi-carrier technology. The introduction of these technologies leads to some different simulation methods(More)