H. Choi

Publications72
h-index12
Citations402
Highly Influential Citations30
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A Comparison of Transcriptional Patterns and Mycological Phenotypes following Infection of Fusarium graminearum by Four Mycoviruses
Many fungi-infecting viruses, which are termed mycoviruses, have been identified, and most do not cause any visible symptoms. Some mycoviruses, however, can attenuate the virulence of the infected… Expand
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The pepper virome: natural co-infection of diverse viruses and their quasispecies
BackgroundThe co-infection of diverse viruses in a host plant is common; however, little is known about viral populations and their quasispecies in the host.ResultsHere, we report the first pepper… Expand
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In silico approach to reveal viral populations in grapevine cultivar Tannat using transcriptome data
Viruses are ubiquitous and present in a wide range of settings, from living organisms to various environments. Although viruses are regarded as important pathogens in higher plants, viral populations… Expand
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Integrated analyses using RNA-Seq data reveal viral genomes, single nucleotide variations, the phylogenetic relationship, and recombination for Apple stem grooving virus
BackgroundNext-generation sequencing (NGS) provides many possibilities for plant virology research. In this study, we performed integrated analyses using plant transcriptome data for plant virus… Expand
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Bacterial communities in the phylloplane of Prunus species
Bacterial populations in the phylloplane of four different Prunus species were investigated by 16 S rRNA pyrosequencing. Bioinformatic analysis identified an average of 510 operational taxonomic… Expand
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In silico identification of Bell pepper endornavirus from pepper transcriptomes and their phylogenetic and recombination analyses.
Here, we identified eight Bell pepper endornavirus (BPEV) isolates from nine different pepper transcriptomes. BPEV was present with low copy numbers ranging from 0.01% to 0.18% in the host… Expand
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Genome Sequence of Grapevine Virus T, a Novel Foveavirus Infecting Grapevine
ABSTRACT Here, we report the genome sequence of grapevine virus T (GVT), a novel single-stranded RNA virus identified from a transcriptome of grapevine. The genome of GVT is 8,701 nucleotides in… Expand
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A simple method for screening of plant NBS-LRR genes that confer a hypersensitive response to plant viruses and its application for screening candidate pepper genes against Pepper mottle virus.
Plant NBS-LRR genes are abundant and have been increasingly cloned from plant genomes. In this study, a method based on agroinfiltration and virus inoculation was developed for the simple and… Expand
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Peach RNA viromes in six different peach cultivars
Many recent studies have demonstrated that several known and unknown viruses infect many horticultural plants. However, the elucidation of a viral population and the understanding of the genetic… Expand
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Genome Sequence of Grapevine Virus K, a Novel Vitivirus Infecting Grapevine
ABSTRACT Here, we report the genome sequence of grapevine virus K (GVK), a novel single-stranded RNA virus identified from a transcriptome of grapevine. The genome of GVK is 7,476 nucleotides in… Expand
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