The B73 Maize Genome: Complexity, Diversity, and Dynamics
- P. Schnable, D. Ware, R. Wilson
- BiologyScience
- 20 November 2009
The sequence of the maize genome reveals it to be the most complex genome known to date and the correlation of methylation-poor regions with Mu transposon insertions and recombination and how uneven gene losses between duplicated regions were involved in returning an ancient allotetraploid to a genetically diploid state is reported.
A draft sequence of the rice genome (Oryza sativa L. ssp. japonica).
The genome of the japonica subspecies of rice, an important cereal and model monocot, was sequenced and assembled by whole-genome shotgun sequencing and suggests that the genome contains 32,000 to 50,000 genes.
Improved maize reference genome with single-molecule technologies
- Yinping Jiao, P. Peluso, D. Ware
- BiologyNature
- 15 January 2017
The assembly and annotation of a reference genome of maize is reported, using single-molecule real-time sequencing and high-resolution optical mapping to identify transposable element lineage expansions that are unique to maize.
A High-Throughput Arabidopsis Reverse Genetics System Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.004630.
- A. Sessions, Ellen Burke, S. Goff
- BiologyThe Plant Cell Online
- 1 December 2002
A collection of Arabidopsis lines with T-DNA insertions in known sites was generated to increase the efficiency of functional genomics and showed a bias against predicted coding sequences.
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
Papaya offers numerous advantages as a system for fruit-tree functional genomics, and this draft genome sequence provides the foundation for revealing the basis of Carica’s distinguishing morpho-physiological, medicinal and nutritional properties.
A High-Throughput Arabidopsis Reverse Genetics System
- A. Sessions, Ellen Burke, S. Goff
- Biology
- 2002
A collection of Arabidopsis lines with T-DNA insertions in known sites was generated to increase the efficiency of functional genomics and showed a bias against predicted coding sequences.
High-resolution pachytene chromosome mapping of bacterial artificial chromosomes anchored by genetic markers reveals the centromere location and the distribution of genetic recombination along…
- Z. Cheng, G. Presting, C. Buell, R. Wing, J. Jiang
- BiologyGenetics
- 1 April 2001
This physical map of rice chromosome 10 developed by fluorescence in situ hybridization (FISH) mapping of bacterial artificial chromosome (BAC) clones on meiotic pachytene chromosomes reveals the precise genetic position of the centromere on chromosome 10.
An Integrated Physical and Genetic Map of the Rice Genome
- Mingsheng Chen, G. Presting, R. Wing
- Biology, MedicineThe Plant Cell Online
- 1 March 2002
This integrated high-resolution physical map of the rice genome will greatly facilitate whole-genome sequencing by helping to identify a minimum tiling path of clones to sequence and will aid map-based cloning of agronomically important genes and will provide an important tool for the comparative analysis of grass genomes.
The I2C family from the wilt disease resistance locus I2 belongs to the nucleotide binding, leucine-rich repeat superfamily of plant resistance genes.
Members of a new multigene family, complex I2C, were isolated by map-based cloning from the I2 F. o.
Rice transposable elements: a survey of 73,000 sequence-tagged-connectors.
A survey of the transposable elements (TE) in >73,000 STCs shows nearly all DNA transposons known previously in plants were present in the STCs, including maize Ac/Ds, En/Spm, Mutator, and mariner-like elements.
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