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- Robert C Gentleman, Vincent J Carey, +22 authors Jianhua Zhang
- Genome Biology
- 2004

The Bioconductor project is an initiative for the collaborative creation of extensible software for computational biology and bioinformatics. The goals of the project include: fostering collaborative development and widespread use of innovative software, reducing barriers to entry into interdisciplinary scientific research, and promoting the achievement of… (More)

- Friedrich Leisch
- 2002

Sweave combines typesetting with LTEX and data anlysis with S into integrated statistical documents. When run through R or Splus, all data analysis output (tables, graphs, . . . ) is created on the fly and inserted into a final LTEX document. Options control which parts of the original S code are shown to or hidden from the reader, respectively. Many S… (More)

- David Meyer, Friedrich Leisch, Kurt Hornik
- Neurocomputing
- 2003

- Friedrich Leisch
- 2003

This article was originally published as Leisch (2004b) in the Journal of Statistical Software. FlexMix implements a general framework for fitting discrete mixtures of regression models in the R statistical computing environment: three variants of the EM algorithm can be used for parameter estimation, regressors and responses may be multivariate with… (More)

This paper introduces ideas and methods for testing for structural change in linear regression models and presents how these have been realized in an R package called strucchange. It features tests from the generalized fluctuation test framework as well as from the F test (Chow test) framework. Extending standard significance tests it contains methods to… (More)

- Friedrich Leisch
- 2005

A methodological and computational framework for centroid-based partitioning cluster analysis using arbitrary distance or similarity measures is presented. The power of highlevel statistical computing environments like R enables data analysts to easily try out various distance measures with only minimal programming effort. A new variant of centroid… (More)

This article is a (slightly) modified version of Grün and Leisch (2008b), published in the Journal of Statistical Software. flexmix provides infrastructure for flexible fitting of finite mixture models in R using the expectation-maximization (EM) algorithm or one of its variants. The functionality of the package was enhanced. Now concomitant variable models… (More)

- Bettina Grün, Friedrich Leisch
- Computational Statistics & Data Analysis
- 2007

R package flexmix provides flexible modelling of finite mixtures of regression models using the EM algorithm. Several new features of the software such as fixed and nested varying effects for mixtures of generalized linear models and multinomial regression for a-priori probabilities given concomitant variables are introduced. The use of the software in… (More)

- M Willeit, N Praschak-Rieder, +13 authors S Kasper
- Molecular psychiatry
- 2003

Serotonergic mechanisms are thought to play an important role in the pathogenesis of seasonal affective disorder (SAD). The expression of the serotonin transporter (5-HTT) is regulated in part by an insertion/deletion polymorphism in the serotonin transporter gene promoter region (5-HTTLPR). The 5-HTTLPR short allele (s) has been associated with… (More)

- Torsten Hothorn, Friedrich Leisch, +4 authors KURT HORNIK
- 2003

The assessment of the performance of learners by means of benchmark experiments is established exercise. In practice, benchmark studies are a tool to compare the performance of several competing algorithms for a certain learning problem. Cross-validation or resampling techniques are commonly used to derive point estimates of the performances which are… (More)