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Next-generation sequencing reveals novel differentially regulated mRNAs, lncRNAs, miRNAs, sdRNAs and a piRNA in pancreatic cancer

• Sören Müller, Susanne Raulefs, +16 authors Christoph W. Michalski
• Molecular Cancer
• 2015

Previous studies identified microRNAs (miRNAs) and messenger RNAs with significantly different expression between normal pancreas and pancreatic cancer (PDAC) tissues. Due to technological… (More)

Gene expression of chicken gonads is sex- and side-specific.

• Jessica Scheider, Fabian Afonso-Grunz, +5 authors Peter Winter
• Sexual development : genetics, molecular biology…
• 2014

In chicken, the left and right female gonads undergo a completely different program during development. To learn more about the molecular factors underlying side-specific development and to identify… (More)

APADB: a database for alternative polyadenylation and microRNA regulation events

• Sören Müller, Lukas Rycak, +8 authors Björn Rotter
• Database
• 2014

Alternative polyadenylation (APA) is a widespread mechanism that contributes to the sophisticated dynamics of gene regulation. Approximately 50% of all protein-coding human genes harbor multiple… (More)

Principles of miRNA–mRNA interactions: beyond sequence complementarity

• Fabian Afonso-Grunz, Sören Müller
• Cellular and Molecular Life Sciences
• 2015

MicroRNAs (miRNAs) are small non-coding RNAs that post-transcriptionally regulate gene expression by altering the translation efficiency and/or stability of targeted mRNAs. In vertebrates, more than… (More)

Genome-based analysis of the transcriptome from mature chickpea root nodules

• Fabian Afonso-Grunz, Carlos Molina, +6 authors Günter Kahl
• Front. Plant Sci.
• 2014

Symbiotic nitrogen fixation (SNF) in root nodules of grain legumes such as chickpea is a highly complex process that drastically affects the gene expression patterns of both the prokaryotic as well… (More)

Dual 3’Seq using deepSuperSAGE uncovers transcriptomes of interacting Salmonella enterica Typhimurium and human host cells

• Fabian Afonso-Grunz, Klaus Hoffmeier, +5 authors Günter Kahl
• BMC Genomics
• 2015

The interaction of eukaryotic host and prokaryotic pathogen cells is linked to specific changes in the cellular proteome, and consequently to infection-related gene expression patterns of the… (More)

Putative alternative polyadenylation (APA) events in the early interaction of Salmonella enterica Typhimurium and human host cells

• Fabian Afonso-Grunz
• Genomics data
• 2015

The immune response of epithelial cells upon infection is mediated by changing activity levels of a variety of proteins along with changes in mRNA, and also ncRNA abundance. Alternative… (More)

Erratum to: Next-generation sequencing reveals novel differentially regulated mRNAs, lncRNAs, miRNAs, sdRNAs and a piRNA in pancreatic cancer

• Sören Müller, Susanne Raulefs, +16 authors Christoph W. Michalski
• Molecular Cancer
• 2015

Background: Previous studies identified microRNAs (miRNAs) and messenger RNAs with significantly different expression between normal pancreas and pancreatic cancer (PDAC) tissues. Due to… (More)

Morphological and transcriptomic effects of endocrine modulators on the gonadal differentiation of chicken embryos: The case of tributyltin (TBT).

• Jessica Scheider, Fabian Afonso-Grunz, Luzie Jessl, Klaus Hoffmeier, Peter Winter, Joerg Oehlmann
• Toxicology letters
• 2018

Morphological malformations induced by tributyltin (TBT) exposure during embryonic development have already been characterized in various taxonomic groups, but, nonetheless, the molecular processes… (More)

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