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We have created PhenomicDB, a multi-species genotype/phenotype database by merging public genotype/phenotype data from a wide range of model organisms and Homo sapiens. Until now these data were available in distinct organism-specific databases (e.g. WormBase, OMIM, FlyBase and MGI). We compiled this wealth of data into a single integrated… (More)

- Osbert Bastani, Christopher J Hillar, Dimitar Popov, J Maurice Rojas
- 2011

Suppose that f is a real univariate polynomial of degree D with exactly 4 monomial terms. We present a deterministic algorithm of complexity polynomial in log D that, for most inputs, counts the number of real roots of f. The best previous algorithms have complexity super-linear in D. We also discuss connections to sums of squares and A-discriminants,… (More)

Suppose f is a real univariate polynomial of degree D with exactly 4 monomial terms. We present an algorithm, with complexity polynomial in log D on average (relative to the stable log-uniform measure), for counting the number of real roots of f. The best previous algorithms had complexity super-linear in D. We also discuss connections to sums of squares… (More)

- Dimitar Popov, Marc H Scholl, Marcel Waldvogel, Zusammenfassung Native
- 2012

The XQuery Update Facility has turned native XML databases from static document-oriented database systems to general purpose transactional systems. Consequently, data structures allowing both fast read and write operations have become a necessity. This thesis presents several such structures and focuses on the challenges that emerge by their application in… (More)

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