Daisuke Shinozaki

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MOTIVATION The problem of finding transcription factor binding sites in the upstream regions of given genes is algorithmically an interesting and challenging problem in computational biology. A degenerate pattern over a finite alphabet Sigma is a sequence of subsets of Sigma. A string over IUPAC nucleic acid codes is also a degenerate pattern over Sigma =(More)
We have previously demonstrated that arginine increases the solubility of aromatic compounds that have poor water solubility, an effect referred to as the "arginine-assisted solubilization system (AASS)". In the current study, we utilized a molecular dynamics simulation to examine the solubilization effects of arginine on caffeic acid, which has a tendency(More)
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