• Publications
  • Influence
MetaboAnalyst 3.0—making metabolomics more meaningful
TLDR
By completely re-implementing the MetaboAnalyst suite using the latest web framework technologies, the server has been able to substantially improve its performance, capacity and user interactivity. Expand
DrugBank: a comprehensive resource for in silico drug discovery and exploration
TLDR
DrugBank is a unique bioinformatics/cheminformatics resource that combines detailed drug data with comprehensive drug target information and is fully searchable supporting extensive text, sequence, chemical structure and relational query searches. Expand
DrugBank 3.0: a comprehensive resource for ‘Omics’ research on drugs
TLDR
DrugBank 3.0 represents the result of 2 years of manual annotation work aimed at making the database much more useful for a wide range of ‘omics’ applications, particularly with regard to drug target, drug description and drug action data. Expand
DrugBank: a knowledgebase for drugs, drug actions and drug targets
TLDR
The latest version of DrugBank (release 2.0) has been expanded significantly over the previous release and contains 60% more FDA-approved small molecule and biotech drugs including 10% more ‘experimental’ drugs. Expand
DrugBank 4.0: shedding new light on drug metabolism
TLDR
The latest update of DrugBank, DrugBank 4.0, has been further expanded to contain data on drug metabolism, absorption, distribution, metabolism, excretion and toxicity (ADMET) and other kinds of quantitative structure activity relationships (QSAR) information. Expand
DrugBank 5.0: a major update to the DrugBank database for 2018
TLDR
This year’s update, DrugBank 5.0, represents the most significant upgrade to the database in more than 10 years and significant improvements have been made to the quantity, quality and consistency of drug indications, drug binding data as well as drug-drug and drug-food interactions. Expand
PHAST: A Fast Phage Search Tool
PHAge Search Tool (PHAST) is a web server designed to rapidly and accurately identify, annotate and graphically display prophage sequences within bacterial genomes or plasmids. It accepts either rawExpand
MetaboAnalyst 2.0—a comprehensive server for metabolomic data analysis
TLDR
MetaboAnalyst 2.0 now contains dozens of new features and functions including new procedures for data filtering, data editing and data normalization and it also supports multi-group data analysis, two-factor analysis as well as time-series data analysis. Expand
MetaboAnalyst: a web server for metabolomic data analysis and interpretation
TLDR
A freely accessible, easy-to-use web server for metabolomic data analysis called MetaboAnalyst, which supports such techniques as: fold change analysis, t-tests, PCA, PLS-DA, hierarchical clustering and a number of more sophisticated statistical or machine learning methods. Expand
HMDB 3.0—The Human Metabolome Database in 2013
TLDR
New database visualization tools and new data content have been added or enhanced to the HMDB, which includes better spectral viewing tools, more powerful chemical substructure searches, an improved chemical taxonomy and better, more interactive pathway maps. Expand
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