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- Publications
- Influence
Computational analysis of auxin responsive elements in the Arabidopsis thaliana L. genome
- V. Mironova, N. Omelyanchuk, D. Wiebe, V. Levitsky
- Biology, Medicine
- BMC Genomics
- 19 December 2014
Auxin responsive elements (AuxRE) were found in upstream regions of target genes for ARFs (Auxin response factors). While Chip-seq data for most of ARFs are still unavailable, prediction of potential… Expand
Auxin regulates functional gene groups in a fold-change-specific manner in Arabidopsis thaliana roots
- N. A. Omelyanchuk, D. Wiebe, +10 authors V. Mironova
- Biology, Medicine
- Scientific Reports
- 30 May 2017
Auxin plays a pivotal role in virtually every aspect of plant morphogenesis. It simultaneously orchestrates a diverse variety of processes such as cell wall biogenesis, transition through the cell… Expand
Meta-analysis of transcriptome data identified TGTCNN motif variants associated with the response to plant hormone auxin in Arabidopsis thaliana L
- E. Zemlyanskaya, D. Wiebe, N. Omelyanchuk, V. Levitsky, V. Mironova
- Computer Science, Medicine
- J. Bioinform. Comput. Biol.
- 27 April 2016
TLDR
Fold-Change-Specific Enrichment Analysis (FSEA): Quantification of Transcriptional Response Magnitude for Functional Gene Groups
- D. Wiebe, Nadezhda A. Omelyanchuk, +4 authors V. Mironova
- Biology, Medicine
- Genes
- 1 April 2020
Gene expression profiling data contains more information than is routinely extracted with standard approaches. Here we present Fold-Change-Specific Enrichment Analysis (FSEA), a new method for… Expand
Meta-Analysis of Transcriptome Data Detected New Potential Players in Response to Dioxin Exposure in Humans
- E. Oshchepkova, Yana Sizentsova, D. Wiebe, V. Mironova, N. Kolchanov
- Biology, Medicine
- International journal of molecular sciences
- 23 October 2020
Dioxins are one of the most potent anthropogenic poisons, causing systemic disorders in embryonic development and pathologies in adults. The mechanism of dioxin action requires an aryl hydrocarbon… Expand