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The Ciliated Protozoa: Characterization, Classification, and Guide to the Literature
TLDR
Deep Phylogeny, Gene Sequences, And Character State Evolution - Mapping The Course of Ciliate Evolution, Including Families And Genera, is mapped.
The New Higher Level Classification of Eukaryotes with Emphasis on the Taxonomy of Protists
TLDR
This revision of the classification of unicellular eukaryotes updates that of Levine et al. (1980) for the protozoa and expands it to include other protists, and proposes a scheme that is based on nameless ranked systematics.
The Revised Classification of Eukaryotes
TLDR
This revision of the classification of eukaryotes retains an emphasis on the protists and incorporates changes since 2005 that have resolved nodes and branches in phylogenetic trees.
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing
TLDR
This Community Page describes a resource of 700 transcriptomes from marine microbial eukaryotes to help understand their role in the world's oceans.
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Molecular Diversity of Methanogens in Feedlot Cattle from Ontario and Prince Edward Island, Canada
TLDR
It is difficult to conclude whether the geographical isolation between these two herds or differences between the two finishing diets directly influenced community structure in the rumen, but nine possible new species were identified from the two clone libraries, including two new species belonging to the order Methanobacteriales and a new genus/species within the orders Methanosarcinales.
Barcoding ciliates: a comprehensive study of 75 isolates of the genus Tetrahymena.
TLDR
The feasibility of using the mitochondrial cox1 gene as a taxonomic marker for 'barcoding' and identifying Tetrahymena species and some other ciliated protists is demonstrated.
Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes
TLDR
It is confirmed that eukaryotes form at least two domains, the loss of monophyly in the Excavata, robust support for the Haptista and Cryptista, and suggested primer sets for DNA sequences from environmental samples that are effective for each clade are provided.
Comparative analysis of the mitochondrial cytochrome c oxidase subunit I (COI) gene in ciliates (Alveolata, Ciliophora) and evaluation of its suitability as a biodiversity marker
TLDR
The resolution of COI at the intraspecific level is much greater than that of any nuclear genes and shows great potential to identify species based on molecular data if a reliable database exists, and resolve the relationships of closely related ciliate taxa and uncover cryptic species.
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