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DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering
DAMMIF, an enhanced and significantly faster implementation of the ab-initio shape-determination program DAMMIN for small-angle scattering data, is presented.
New developments in the ATSAS program package for small-angle scattering data analysis
The paper presents new developments and amendments to the ATSAS package (version 2.4) for processing and analysis of isotropic small-angle scattering data.
ATSAS 2.8: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions
Developments and improvements of the ATSAS software suite (versions 2.5–2.8) for analysis of small-angle scattering data of biological macromolecules or nanoparticles are described.
Versatile sample environments and automation for biological solution X-ray scattering experiments at the P12 beamline (PETRA III, DESY)
An integrated environment for biological small-angle X-ray scattering (BioSAXS) at the high-brilliance P12 synchrotron beamline of the EMBL (DESY, Hamburg) allows for a broad range of solution
Correlation Map, a goodness-of-fit test for one-dimensional X-ray scattering spectra
A goodness-of-fit test, Correlation Map (CorMap), is reported, for assessing differences between one-dimensional spectra independently of explicit error estimates, using only data point correlations.
Shortwave infrared fluorescence imaging with the clinically approved near-infrared dye indocyanine green
Indocyanine green, a clinically approved near-IR dye, exhibits a remarkable amount of SWIR emission, which enables state-of-the-art SWIR imaging with direct translation potential into clinical settings, and even outperforms other commercially available SWIR emitters.
The Dimer Interface of the Membrane Type 1 Matrix Metalloproteinase Hemopexin Domain
The mutations of amino acids involved in the interaction weakened the dimer interaction of Hpx domains in solution, and incorporation of these mutations into the full-length enzyme significantly inhibited dimer-dependent functions on the cell surface.
WeNMR: Structural Biology on the Grid
The WeNMR consortium has established standard computational workflows and services through easy-to-use web interfaces, while still retaining sufficient flexibility to handle more specific requests, and has become the first Virtual Research Community officially recognized by the EGI.
ATSAS 3.0: expanded functionality and new tools for small-angle scattering data analysis
Developments in the ATSAS 3.0 release are described, including new programs for data simulation and for the structural modelling of lipids, nucleic acids and polydisperse systems.