This data article describes a controlled, spiked proteomic dataset for which the "ground truth" of variant proteins is known. It is based on the LC-MS analysis of samples composed of a fixed background of yeast lysate and different spiked amounts of the UPS1 mixture of 48 recombinant proteins. It can be used to objectively evaluate bioinformatic pipelines… (More)
Samuel Maintainer, Wieczorek, Hovasse A, Marcellin M, Hesse Am, E Mouton-Barbosa+12 others
Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods. (2016). Calibration plot for proteomics: A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments.