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A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
- D. Parks, M. Chuvochina, P. Hugenholtz
- BiologyNature Biotechnology
- 27 August 2018
TLDR
Insights into the phylogeny and coding potential of microbial dark matter
- Christian Rinke, P. Schwientek, T. Woyke
- BiologyNature
- 25 July 2013
TLDR
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
- D. Parks, Christian Rinke, G. Tyson
- Biology, EngineeringNature Microbiology
- 11 September 2017
TLDR
A complete domain-to-species taxonomy for Bacteria and Archaea
- D. Parks, M. Chuvochina, Pierre-Alain Chaumeil, Christian Rinke, Aaron J. Mussig, P. Hugenholtz
- BiologyNature Biotechnology
- 27 April 2020
TLDR
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
- R. M. Bowers, N. Kyrpides, T. Woyke
- Biology, EngineeringNature Biotechnology
- 1 August 2017
TLDR
Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor
- M. Nobu, T. Narihiro, Wen-Tso Liu
- BiologyThe ISME Journal
- 23 January 2015
TLDR
Phylogeny and physiology of candidate phylum ‘Atribacteria’ (OP9/JS1) inferred from cultivation-independent genomics
- M. Nobu, J. Dodsworth, B. Hedlund
- BiologyThe ISME Journal
- 1 February 2016
TLDR
Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
- Christian Rinke, Janey Lee, T. Woyke
- BiologyNature Protocols
- 1 May 2014
TLDR
An environmental bacterial taxon with a large and distinct metabolic repertoire
- M. Wilson, Tetsushi Mori, J. Piel
- BiologyNature
- 6 February 2014
TLDR
GTDB: an ongoing census of bacterial and archaeal diversity through a phylogenetically consistent, rank normalized and complete genome-based taxonomy
- D. Parks, M. Chuvochina, Christian Rinke, Aaron J. Mussig, Pierre-Alain Chaumeil, P. Hugenholtz
- BiologyNucleic acids research
- 14 September 2021
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