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- Publications
- Influence
Performance of the MM/GBSA scoring using a binding site hydrogen bond network-based frame selection: the protein kinase case.
- Francisco Adasme-Carreño, C. Muñoz-Gutiérrez, J. Caballero, Jans H. Alzate-Morales
- Chemistry, Medicine
- Physical chemistry chemical physics : PCCP
- 18 June 2014
A conformational selection method, based on hydrogen bond (Hbond) network analysis, has been designed in order to rationalize the configurations sampled using molecular dynamics (MD), which are… Expand
Novel Coumarin-Quinoline Hybrids: Design of Multitarget Compounds for Alzheimer's Disease
- Yorley Duarte, André Fonseca, +7 authors M. Matos
- Chemistry
- 17 January 2019
Study of the interactions between Edaglitazone and Ciglitazone with PPAR&ggr; and their antiplatelet profile
- C. Muñoz-Gutiérrez, C. Sepúlveda, J. Caballero, I. Palomo, E. Fuentes
- Chemistry, Medicine
- Life sciences
- 1 October 2017
ABSTRACT Peroxisome proliferator‐activated receptor &ggr; (PPAR&ggr;) is a ligand‐activated transcription factor with an important role in lipid metabolism, inflammation and cardiovascular diseases.… Expand
Binding-affinity predictions of HSP90 in the D3R Grand Challenge 2015 with docking, MM/GBSA, QM/MM, and free-energy simulations
- Majda Misini Ignjatović, Octav Caldararu, G. Dong, C. Muñoz-Gutiérrez, Francisco Adasme-Carreño, U. Ryde
- Chemistry, Medicine
- Journal of Computer-Aided Molecular Design
- 26 August 2016
TLDR
Computational study of the binding orientation and affinity of PPARγ agonists: inclusion of ligand-induced fit by cross-docking
- C. Muñoz-Gutiérrez, Francisco Adasme-Carreño, E. Fuentes, I. Palomo, J. Caballero
- Chemistry
- 6 July 2016
The peroxisome proliferator-activated receptors (PPARs) comprise a family of three nuclear receptor isoforms (γ, β/δ, α) which are key regulators of metabolism and inflammation. A series of potent… Expand
HQSAR and molecular docking studies of furanyl derivatives as adenosine A2A receptor antagonists
- C. Muñoz-Gutiérrez, J. Caballero, A. Morales-Bayuelo
- Chemistry
- Medicinal Chemistry Research
- 15 April 2016
Structure- and ligand-based computational design strategies were used to understand the molecular requirements of furanyl derivatives 2-(furan-2-yl)-[1,2,4]triazolo[1,5-f]pyrimidin-5-amines (TfPAs),… Expand
Halogen bonding in drug-like molecules: a computational and systematic study of the substituent effect
- Francisco Adasme-Carreño, C. Muñoz-Gutiérrez, Jans H. Alzate-Morales
- Chemistry
- 24 June 2016
Halogen bonding (XB) is a noncovalent interaction that has been increasingly used in molecular recognition, and more recently, in protein–ligand binding. We have studied and quantified, using density… Expand
A2EPG: A new software for the analysis of electrical penetration graphs to study plant probing behaviour of hemipteran insects
- Francisco Adasme-Carreño, C. Muñoz-Gutiérrez, Josselyn Salinas-Cornejo, Claudio C. Ramírez
- Engineering, Computer Science
- Comput. Electron. Agric.
- 1 April 2015
TLDR
Docking and quantitative structure–activity relationship of bi-cyclic heteroaromatic pyridazinone and pyrazolone derivatives as phosphodiesterase 3A (PDE3A) inhibitors
- C. Muñoz-Gutiérrez, Daniela Cáceres-Rojas, Francisco Adasme-Carreño, I. Palomo, E. Fuentes, J. Caballero
- Chemistry, Medicine
- PloS one
- 7 December 2017
PDE3s belong to the phosphodiesterases family, where the PDE3A isoform is the major subtype in platelets involved in the cAMP regulation pathway of platelet aggregation. PDE3A inhibitors have been… Expand