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What is flux balance analysis?
- Jeffrey D. Orth, I. Thiele, B. Palsson
- PhysicsNature Biotechnology
- 1 March 2010
TLDR
A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information
- A. Feist, C. Henry, B. Palsson
- Biology, EngineeringMolecular systems biology
- 26 June 2007
TLDR
Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0
- Jan Schellenberger, Richard A Que, B. Palsson
- BiologyNature Protocols
- 1 March 2007
Over the past decade, a growing community of researchers has emerged around the use of constraint-based reconstruction and analysis (COBRA) methods to simulate, analyze and predict a variety of…
A protocol for generating a high-quality genome-scale metabolic reconstruction
- I. Thiele, B. Palsson
- BiologyNature Protocols
- 2010
TLDR
Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox
- S. Becker, A. Feist, Monica L. Mo, G. Hannum, B. Palsson, Markus J. Herrgård
- Biology, Computer ScienceNature Protocols
- 2007
TLDR
Metabolic Flux Balancing: Basic Concepts, Scientific and Practical Use
- A. Varma, B. Palsson
- BiologyBio/Technology
- 1 October 1994
TLDR
Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110
- A. Varma, B. Palsson
- Biology, EngineeringApplied and environmental microbiology
- 1 October 1994
TLDR
Systems Biology: Properties of Reconstructed Networks
- B. Palsson
- Mathematics
- 16 January 2006
Preface 1. Introduction 2. Basic concepts in systems biology Part I. Reconstruction of Biochemical Networks: 3. Metabolic networks 4. Regulatory networks 5. Signalling networks Part II. Mathematical…
Global reconstruction of the human metabolic network based on genomic and bibliomic data
- Natalie C Duarte, S. Becker, B. Palsson
- BiologyProceedings of the National Academy of Sciences
- 6 February 2007
TLDR
An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)
- J. Reed, Thuy D. Vo, C. Schilling, B. Palsson
- BiologyGenome Biology
- 28 August 2003
TLDR
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