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—The QR factorization and the SVD are two fundamental matrix decompositions with applications throughout scientific computing and data analysis. For matrices with many more rows than columns, so-called " tall-and-skinny matrices, " there is a numerically stable, efficient, communication-avoiding algorithm for computing the QR factoriza-tion. It has been… (More)

Numerous algorithms are used for nonnegative matrix fac-torization under the assumption that the matrix is nearly separable. In this paper, we show how to make these algorithms efficient for data matrices that have many more rows than columns, so-called " tall-and-skinny matrices ". One key component to these improved methods is an orthogonal matrix… (More)

Spectral graph theory-based methods represent an important class of tools for studying the structure of networks. Spectral methods are based on a first-order Markov chain derived from a random walk on the graph and thus they cannot take advantage of important higher-order network substructures such as triangles, cycles, and feed-forward loops. Here we… (More)

Matrix multiplication is a fundamental computation in many scientific disciplines. In this paper, we show that novel fast matrix multiplication algorithms can significantly outperform vendor implementations of the classical algorithm and Strassen's fast algorithm on modest problem sizes and shapes. Furthermore, we show that the best choice of fast… (More)

Errors due to hardware or low level software problems, if detected, can be fixed by various schemes, such as recomputation from a checkpoint. Silent errors are errors in application state that have escaped low-level error detection. At extreme scale, where machines can perform astronomically many operations per second, silent errors threaten the validity of… (More)

Multinomial logistic regression is a powerful tool to model choice from a finite set of alternatives, but it comes with an underlying model assumption called the independence of irrelevant alternatives , stating that any item added to the set of choices will decrease all other items' likelihood by an equal fraction. We perform statistical tests of this… (More)

Random walks are a fundamental model in applied mathematics and are a common example of a Markov chain. The limiting stationary distribution of the Markov chain represents the fraction of the time spent in each state during the stochastic process. A standard way to compute this distribution for a random walk on a finite set of states is to compute the… (More)

- Austin R Benson, Sven Schmit, Robert Schreiber
- 2014

Errors due to hardware or low level software problems, if detected, can be fixed by various schemes, such as recomputation from a checkpoint. Silent errors are errors in application state that have escaped low-level error detection. At extreme scale, where machines can perform astronomically many operations per second, silent errors threaten the validity of… (More)

Networks are a fundamental tool for understanding and modeling complex systems in physics, biology, neuroscience, engineering, and social science. Many networks are known to exhibit rich, lower-order connectivity patterns that can be captured at the level of individual nodes and edges. However, higher-order organization of complex networks--at the level of… (More)

Fast algorithms for matrix multiplication, or those that perform asymptotically fewer scalar operations than the classical algorithm, have been considered primarily of theoretical interest. Aside from Strassen's original algorithm, few fast algorithms have been efficiently implemented or used in practical applications. However, there exist many practical… (More)