Anup Bhattacharya

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To identify the genetic modifier(s) that might alter the age at onset in Huntington's disease (HD) we have analyzed variations in GluR6 kainate receptor (GluR6), CA150 gene, Delta2642 and polymorphic CCG repeat variation in huntingtin (htt) gene in 77 HD patients and normal individuals. In addition, variation in the RAI1 gene was analyzed in 30(More)
The k-means++ seeding algorithm is one of the most popular algorithms that is used for finding the initial k centers when using the k-means heuristic. The algorithm is a simple sampling procedure and can be described as follows: Pick the first center randomly from the given points. For i > 1, pick a point to be the i th center with probability proportional(More)
Space efficient algorithms play a central role in dealing with large amount of data. In such settings, one would like to analyse the large data using small amount of " working space ". One of the key steps in many algorithms for analysing large data is to maintain a (or a small number) random sample from the data points. In this paper, we consider two space(More)
Eta pairing on a supersingular elliptic curve over the binary field F 2 1223 used to offer 128-bit security, and has been studied extensively for efficient implementations. In this paper, we report our GPU-based implementations of this algorithm on an NVIDIA Tesla C2050 platform. We propose efficient parallel implementation strategies for multiplication,(More)
The classical center based clustering problems such as k-means/median/center assume that the optimal clusters satisfy the locality property that the points in the same cluster are close to each other. A number of clustering problems arise in machine learning where the optimal clusters do not follow such a locality property. For instance, consider the(More)
Activation of NMDA receptors can induce iron movement into neurons by the small GTPase Dexras1 via the divalent metal transporter 1 (DMT1). This pathway under pathological conditions such as NMDA excitotoxicity contributes to metal-catalyzed reactive oxygen species (ROS) generation and neuronal cell death, and yet its physiological role is not well(More)
Privacy and authenticity are two essential security attributes of secure Vehicle-to-Vehicle communications. Pseudonymous Public Key Infrastructure (PPKI), an extension of standard PKI, has been proposed to achieve these security attributes. In Pseudonymous PKI, a user needs certificates or pseudonyms periodically from the Certificate Authority (CA) to(More)
Eta pairing on supersingular elliptic curves defined over fields of characteristics two and three is a popular and practical variant of pairing used in many cryptographic protocols. In this paper, we study SIMD-based implementations of eta pairing over these fields. Our implementations use standard SIMD-based vectorization techniques which we call(More)
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