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Genomic Diversity within the Enterobacter cloacae Complex
Background Isolates of the Enterobacter cloacae complex have been increasingly isolated as nosocomial pathogens, but phenotypic identification of the E. cloacae complex is unreliable andExpand
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Phylogeny and Identification of Pantoea Species and Typing of Pantoea agglomerans Strains by Multilocus Gene Sequencing
ABSTRACT Pantoea agglomerans and other Pantoea species cause infections in humans and are also pathogenic to plants, but the diversity of Pantoea strains and their possible association with hosts andExpand
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Species delineation and clonal diversity in four Bifidobacterium species as revealed by multilocus sequencing.
The genus Bifidobacterium comprises several species that are important contributors to the gut microbiome, with some strains having beneficial health effects. Understanding the evolutionary emergenceExpand
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Recombining population structure of Plesiomonas shigelloides (Enterobacteriaceae) revealed by multilocus sequence typing.
Plesiomonas shigelloides is an emerging pathogen that is widespread in the aquatic environment and is responsible for intestinal diseases and extraintestinal infections in humans and other animals.Expand
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PCR-Based Identification of Klebsiella pneumoniae subsp. rhinoscleromatis, the Agent of Rhinoscleroma
Rhinoscleroma is a chronic granulomatous infection of the upper airways caused by the bacterium Klebsiella pneumoniae subsp. rhinoscleromatis. The disease is endemic in tropical and subtropicalExpand
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Recombining population structure of the Enterobacteriaceae 1 Plesiomonas shigelloides revealed by multilocus sequence typing 2 3 4
Anna Salerno #,1,2 , Alexis Delétoile #,1 , Martine Lefevre 1 , Ivan Ciznar 3 , Karel Krovacek 4 , 5 Patrick Grimont 1 and Sylvain Brisse 1* 6 7 8 9 10 # Contributed equally to this work 11 12 1Expand
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Reconstructed Ancestral Sequences Improve Pathogen Identification Using Resequencing DNA Microarrays
We describe the benefit of using reconstructed ancestral sequences (RAS) on resequencing microarrays for rapid pathogen identification, with Enterobacteriaceae rpoB sequences as a model. Our resultsExpand
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Phylogénie, espèces et populations bactériennes : Séquençage de gènes ubiquistes chez les Enterobacteriaceae et Bifidobacterium
La diversite phylogenetique bacterienne est d'une richesse considerable, tant en nombre d'especes que par la diversite clonale en leur sein. La connaissance de cette biodiversite est necessaire pourExpand