Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding
- P. Taberlet, E. Coissac, E. Willerslev
- BiologyNucleic Acids Research
- 14 December 2006
The resolution power of the whole chloroplast trnL (UAA) intron and its P6 loop and has the potential to be extensively used in food industry, in forensic science, in diet analyses based on feces and in ancient DNA studies.
DNA barcoding for ecologists.
- A. Valentini, F. Pompanon, P. Taberlet
- Biology, Environmental ScienceTrends in Ecology & Evolution
- 1 February 2009
Next‐generation monitoring of aquatic biodiversity using environmental DNA metabarcoding
- A. Valentini, P. Taberlet, T. Dejean
- Environmental ScienceMolecular Ecology
- 1 February 2016
It is argued that the proposed DNA‐based approach has the potential to become the next‐generation tool for ecological studies and standardized biodiversity monitoring in a wide range of aquatic ecosystems.
Improved detection of an alien invasive species through environmental DNA barcoding: the example of the American bullfrog Lithobates catesbeianus
- T. Dejean, A. Valentini, C. Miquel, P. Taberlet, E. Bellemain, C. Miaud
- Environmental Science
- 1 August 2012
It is demonstrated that the eDNA method is valuable for species detection and surpasses traditional amphibian survey methods in terms of sensitivity and sampling effort, suggesting that traditional field surveys have strongly underestimated the distribution of the American bullfrog.
New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach
- A. Valentini, C. Miquel, P. Taberlet
- Environmental Science, BiologyMolecular Ecology Resources
- 1 January 2009
This work demonstrated that this new method for species identification using universal primers that amplify a very short but informative DNA fragment can be applied for diet analyses of a wide range of phytophagous species at large scales and is efficient for mammals, birds, insects and molluscs.
Persistence of Environmental DNA in Freshwater Ecosystems
- T. Dejean, A. Valentini, C. Miaud
- Environmental Science, BiologyPLoS ONE
- 8 August 2011
Improve the knowledge on DNA persistence in water in order to confirm the presence of the focus species in freshwater ecosystems and to greatly influence planning of biodiversity inventories and biosecurity surveys.
Environmental DNA surveillance for invertebrate species: advantages and technical limitations to detect invasive crayfish Procambarus clarkii in freshwater ponds.
- A. Tréguier, A. Tréguier, J. Roussel
- Environmental Science, Biology
- 1 August 2014
This work examines the reliability of using eDNA to detect the presence of an invasive freshwater crustacean species, the red swamp crayfish Procambarus clarkii, and develops a combination of environmental DNA (eDNA) and conventional trapping methods to monitor the invasion.
GENETIC RELATIONSHIPS AMONG ANISAKIS SPECIES (NEMATODA: ANISAKIDAE) INFERRED FROM MITOCHONDRIAL COX2 SEQUENCES, AND COMPARISON WITH ALLOZYME DATA
- A. Valentini, S. Mattiucci, G. Nascetti
- BiologyJournal of Parasitology
- 1 February 2006
Phylogenetic analyses based upon Parsimony and Bayesian Inference, as well as phenetic analysis based upon Neighbor-Joining p-distance values, generated similar tree topologies, each well supported at major nodes.
Using eDNA to develop a national citizen science-based monitoring programme for the great crested newt (Triturus cristatus)
- J. Biggs, N. Ewald, Francesca Dunn
- Environmental Science
- 1 March 2015
Environmental DNA reveals quantitative patterns of fish biodiversity in large rivers despite its downstream transportation
These results are the first demonstration of the capacity of eDNA metabarcoding to describe longitudinal fish assemblage patterns in a large river, and eDNA integrated a larger space than the classical sampling location and appears to be a reliable, cost-effective method for future monitoring.
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