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Application of RNA-seq to reveal the transcript profile in bacteria.
- A. Pinto, H. P. Melo-Barbosa, A. Miyoshi, A. Silva, V. Azevedo
- BiologyGenetics and molecular research : GMR
This review describes bacterial RNA sequencing studies that use new generation sequencing techniques, and examined the advantages and biases of these new generation technologies.
The Pan-Genome of the Animal Pathogen Corynebacterium pseudotuberculosis Reveals Differences in Genome Plasticity between the Biovar ovis and equi Strains
The polymerization of complete pilus structures inBiovar ovis could be responsible for a remarkable ability of these strains to spread throughout host tissues and penetrate cells to live intracellularly, in contrast with the biovar equi, which rarely attacks visceral organs.
Differential transcriptional profile of Corynebacterium pseudotuberculosis in response to abiotic stresses
A better biological understanding of this bacterium is provided, light is shed on the most likely survival mechanisms used by this microorganism in adverse environments and candidates that may help reduce or even eradicate the problems caused by this disease are identified.
Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains
These particular genome characteristics of C. pseudotuberculosis, as well as its acquired virulence factors in pathogenicity islands, provide evidence of its lifestyle and of the pathogenic pathways used by this pathogen in the infection process.
Genome Sequence of Exiguobacterium antarcticum B7, Isolated from a Biofilm in Ginger Lake, King George Island, Antarctica
The genome of E. antarcticum B7 is presented, isolated from a biofilm sample of Ginger Lake on King George Island, Antarctic peninsula, in order to improve understanding of the mechanisms of adaptation and survival at low temperatures.
Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production.
Reference genes for RT-qPCR studies in Corynebacterium pseudotuberculosis identified through analysis of RNA-seq data
High-throughput sequencing of bacterial transcriptomes using the RNA-seq methodology now provides a wealth of data that may be searched for identification of the most stably expressed genes of a given bacterium, including Corynebacterium pseudotuberculosis.
Complete Genome Sequence of Corynebacterium pseudotuberculosis Strain Cp267, Isolated from a Llama
The genome of Corynebacterium pseudotuberculosis strain 267, isolated from a llama, is reported, which is of great veterinary and economic importance, as it is the cause of caseous lymphadenitis in several livestock species around the world and causes significant losses due to the high cost of treatment.
Progression of ‘OMICS’ methodologies for understanding the pathogenicity of Corynebacterium pseudotuberculosis: the Brazilian experience
- F. Dorella, A. Gala-García, Artur Silva
- BiologyComputational and structural biotechnology…
- 1 March 2013
This review presents the latest findings on C. pseudotuberculosis that have been obtained with the most advanced techniques for sequencing and genomic organization and discusses the development of in silico tools for processing these data to prompt a better understanding of this pathogen.
Structure of 2'-(N-isopropyloxamoyl)acetanilide, C13H16N2O3
The dihedral angle between the acetyl moiety and the phenyl ring is 33.7 (3) o . The C(2)-C(3) distance is 1.530 (5) A. The molecules are linked through hydrogen bonds