• Publications
  • Influence
ProteomeXchange provides globally co-ordinated proteomics data submission and dissemination
5. Tools available and ways to submit data to PX ............................................................. 11 5.1. MS/MS data submissions to PRIDEExpand
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2016 update of the PRIDE database and its related tools
The PRoteomics IDEntifications (PRIDE) database is one of the world-leading data repositories of mass spectrometry (MS)-based proteomics data. Since the beginning of 2014, PRIDE ArchiveExpand
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The PRIDE database and related tools and resources in 2019: improving support for quantification data
Abstract The PRoteomics IDEntifications (PRIDE) database (https://www.ebi.ac.uk/pride/) is the world’s largest data repository of mass spectrometry-based proteomics data, and is one of the foundingExpand
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The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition
The ProteomeXchange (PX) Consortium of proteomics resources (http://www.proteomexchange.org) was formally started in 2011 to standardize data submission and dissemination of mass spectrometryExpand
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The Proteomics Identifications (PRIDE) database and associated tools: status in 2013
The PRoteomics IDEntifications (PRIDE, http://www.ebi.ac.uk/pride) database at the European Bioinformatics Institute is one of the most prominent data repositories of mass spectrometry (MS)-basedExpand
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2016 update of the PRIDE database and its related tools
The PRoteomics IDEntifications (PRIDE) database is one of the world-leading data repositories of mass spectrometry (MS)-based proteomics data. Since the beginning of 2014, PRIDE ArchiveExpand
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The PRoteomics IDEntification (PRIDE) Converter 2 Framework: An Improved Suite of Tools to Facilitate Data Submission to the PRIDE Database and the ProteomeXchange Consortium*
The original PRIDE Converter tool greatly simplified the process of submitting mass spectrometry (MS)-based proteomics data to the PRIDE database. However, after much user feedback, it was noted thatExpand
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2016 update of the PRIDE database and its related tools
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PRIDE Inspector: a tool to visualize and validate MS proteomics data
This work was supported by the Wellcome Trust (grant number WT085949MA) and EMBL core funding. R.G.C. is supported by EU FP7 grant SLING (grant number 226073). J.A.V. is supported by the EU FP7Expand
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PRIDE Inspector Toolsuite: Moving Toward a Universal Visualization Tool for Proteomics Data Standard Formats and Quality Assessment of ProteomeXchange Datasets*
The original PRIDE Inspector tool was developed as an open source standalone tool to enable the visualization and validation of mass-spectrometry (MS)-based proteomics data before data submission orExpand
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